MetaboScape® Bibliography
MetaboScape® Bibliography 2024
| Title | Author | Publication | Link |
|---|---|---|---|
| Sodium doping and trapped ion mobility spectrometry improve lipid detection for novel MALDI-MSI analysis of oats | Lau W.C.; Donnellan L. et al. | Food Chemistry | https://doi.org/10.2139/ssrn.4474290 |
| Ultrasonic elastography for the prevention of breast implant rupture: Detection of an increase with stiffness over implantation time | Ruffenach L.; Heintz D. et al. | Journal of Biomechanics | https://doi.org/10.1016/j.jbiomech.2024.111955 |
| Comprehensive characterization of organic compounds in indoor dust after generic sample preparation with SUPRAS and analysis by LC-HRMS/MS | Ballesteros-Gómez A.; Ballesteros J. et al. | Science of The Total Environment | https://doi.org/10.1016/j.scitotenv.2023.169390 |
| Untargeted Metabolomics of Bladder Tissue using Liquid Chromatography and Quadrupole Time-of-Flight Mass Spectrometry for Cancer Biomarker Detection | Nizioł J.; Ossoliński K. et al. | Journal of Pharmaceutical and Biomedical Analysis | https://doi.org/10.1016/j.jpba.2024.115966 |
| Untargeted 4D-metabolomics using Trapped Ion Mobility combined with LC-HRMS in extra virgin olive oil adulteration study with lower-quality olive oils | Drakopoulou S.K.; Kritikou A.S. et al. | Food Chemistry | https://doi.org/10.1016/j.foodchem.2023.137410 |
| Electronic cigarette vapor disrupts key metabolic pathways in human lung epithelial cells | Assiri M.A.; Al Jumayi S.R. et al. | Saudi Pharmaceutical Journal | https://doi.org/10.1016/j.jsps.2023.101897 |
| The Circadian Metabolome of Atopic Dermatitis | Ratley G.; Zeldin J. et al. | Journal of Allergy and Clinical Immunology | https://doi.org/10.1016/j.jaci.2023.11.926 |
| Impact of Saccharomyces cerevisiae yeast inoculation mode on wine composition | Bordet F.; Romanet R. et al. | Food Chemistry | https://doi.org/10.1016/j.foodchem.2024.138391 |
| Protective role of fetal bovine serum on PLHC-1 spheroids exposed to a mixture of plastic additives: A lipidomic perspective | Wang T.; Desmet J. et al. | Toxicology in Vitro | https://doi.org/10.1016/j.tiv.2024.105771 |
| Potential roles of HSYA in attenuating sepsis-induced liver injury through multi-omics analysis | Pan B.; Yang Y. et al. | Journal of Pharmaceutical and Biomedical Analysis | https://doi.org/10.1016/j.jpba.2023.115801 |
| An acyl-CoA thioesterase is essential for the biosynthesis of a key dauer pheromone in C. elegans | Bhar S.; Yoon C. et al. | Cell Chemical Biology | https://doi.org/10.1016/j.chembiol.2023.12.006 |
| Genomes of nine biofilm-forming filamentous strains of Cyanobacteria (genera Jaaginema, Scytonema, and Karukerafilum gen. nov.) isolated from mangrove habitats of Guadeloupe (Lesser Antilles) | Halary S.; Duval C. et al. | FEMS microbes | https://doi.org/10.1093/femsmc/xtad024 |
| Determination of alkaloid-inspired molecule vindeburnol in rabbit plasma by UPLC–HRMS and its application to pharmacokinetic studies and preliminary metabolite identification | Tsedilin A.; Borets L. et al. | Journal of Pharmaceutical and Biomedical Analysis | https://doi.org/10.1016/j.jpba.2023.115917 |
| Analysis of the phytochemical components of Prunella vulgaris using high‐performance liquid chromatography quadrupole time‐of‐flight mass spectrometry combined with molecular networking and assessment of their antioxidant and anti‐α‐glucosidase activities | Cao L.; Li Y. et al. | Biomedical Chromatography | https://doi.org/10.1002/bmc.5771 |
| Prostaglandin E2 controls the metabolic adaptation of T cells to the intestinal microenvironment | Villa M.; Sanin D.E. et al. | Nature Communications | https://doi.org/10.1136/annrheumdis-2023-eular.3043 |
| Biosynthesis, herbivore induction, and defensive role of phenylacetaldoxime glucoside | Müller A.T.; Nakamura Y. et al. | Plant Physiology | https://doi.org/10.1093/plphys/kiad448 |
MetaboScape® Bibliography 2023
| Title | Author | Publication | Link |
|---|---|---|---|
| Diisocyanates influence models of atopic dermatitis through direct activation of TRPA1 | Yadav M.; Chaudhary P.P. et al. | PLoS One | https://doi.org/10.1371/journal.pone.0282569 |
| Exposure to isocyanates predicts atopic dermatitis prevalence and disrupts therapeutic pathways in commensal bacteria | Zeldin J.; Chaudhary P.P. et al. | Science Advances | https://doi.org/10.1126/sciadv.ade8898 |
| Tandemly duplicated CYP82Ds catalyze 14-hydroxylation in triptolide biosynthesis and precursor production in Saccharomyces cerevisiae | Zhang Y.; Gao J. et al. | Nature Communications | https://doi.org/10.1038/s41467-023-36353-y |
| Hepatic glutamine synthetase controls N 5-methylglutamine in homeostasis and cancer | Villar V.H.; Allega M.F. et al. | Nature Chemical Biology | https://doi.org/10.1038/s41589-022-01154-9 |
| Applications and continued evolution of glycan imaging mass spectrometry | McDowell C.T.; Lu X. et al. | Mass Spectrometry Reviews | https://doi.org/10.1002/mas.21725 |
| Visualization of metabolites and microbes at high spatial resolution using MALDI mass spectrometry imaging and in situ fluorescence labeling | Bourceau P.; Geier B. et al. | Nature Protocols | https://doi.org/10.1038/s41596-023-00864-1 |
| Mass spectrometry imaging for biosolids characterization to assess ecological or health risks before reuse | Villette C.; Maurer L. et al. | Nature Communications | https://doi.org/10.1038/s41467-023-40051-0 |
| Spatial metabolomics principles and application to cancer research | Planque M.; Igelmann S. et al. | Current Opinion in Chemical Biology | https://doi.org/10.1016/j.cbpa.2023.102362 |
| Spatially resolved metabolites in stable and unstable human atherosclerotic plaques identified by mass spectrometry imaging | Seeley E.H.; Liu Z. et al. | Arteriosclerosis, thrombosis, and vascular biology | https://doi.org/10.1161/atvb.42.suppl_1.441 |
| Recent Contributions of Mass Spectrometry-Based “Omics” in the Studies of Breast Cancer | Banerjee S.; Hatimuria M. et al. | Chemical Research in Toxicology | https://doi.org/10.1021/acs.chemrestox.3c00223 |
| Multilayered regulation of developmentally programmed pre-anthesis tip degeneration of the barley inflorescence | Shanmugaraj N.; Rajaraman J. et al. | The Plant Cell | https://doi.org/10.1093/plcell/koad164 |
| Strigolactones repress nodule development and senescence in pea | Van Dingenen J.; De Keyser A. et al. | The Plant Journal | https://doi.org/10.1111/tpj.16421 |
| Peptidomics Approach to Proteomics | Hellinger R.; Sigurdsson A. et al. | Nature Reviews Methods Primers | https://doi.org/10.1002/9780470196502.ch8 |
| Metformin monotherapy alters the human plasma lipidome independent of clinical markers of glycemic control and cardiovascular disease risk in a type 2 diabetes clinical cohort | Wancewicz B.; Zhu Y. et al. | Journal of Pharmacology and Experimental Therapeutics | https://doi.org/10.1124/jpet.122.001493 |
| Dataset on metabolome dimorphism in different organs of mature Palaemon serratus prawn | Marie B.; Coulaud R. et al. | Data in Brief | https://doi.org/10.1016/j.dib.2023.109038 |
| Lipid oxidation induced protein scission in an oleogel as a model food | Meissner P.M.; Keppler J.K. et al. | Food Chemistry | https://doi.org/10.1016/j.foodchem.2022.135357 |
| Characterisation and localisation of plant metabolites involved in pharmacophagy in the turnip sawfly | Brueggemann L.; Tewes L.J. et al. | Plos one | https://doi.org/10.1371/journal.pone.0291180 |
| Molecular, biochemical and metabolomics analyses reveal constitutive and pathogen-induced defense responses of two sugarcane contrasting genotypes against leaf scald disease | Bini A.P.; Rossi G.D. et al. | Plant Physiology and Biochemistry | https://doi.org/10.1016/j.plaphy.2023.108033 |
| Metabolomics profiling and chemoresistance mechanisms in ovarian cancer cell lines: Implications for targeting glutathione pathway | Alarcon-Zapata P.; Perez A.J. et al. | Life Sciences | https://doi.org/10.1016/j.lfs.2023.122166 |
| Comparison of Data-Dependent Acquisition, Data-Independent Acquisition, and Parallel Reaction Monitoring in Trapped Ion Mobility Spectrometry–Time-of-Flight Tandem Mass Spectrometry-Based Lipidomics | Rudt E.; Feldhaus M. et al. | Analytical Chemistry | https://doi.org/10.1021/acs.analchem.3c00440.s002 |
| Insights on the Organ-Dependent, Molecular Sexual Dimorphism in the Zebra Mussel, Dreissena polymorpha, Revealed by Ultra-High-Performance Liquid Chromatography–Tandem Mass Spectrometry Metabolomics | Lance E.; Sartor L. et al. | Metabolites | https://doi.org/10.3390/metabo13101046 |
| The Nox2-ROS-Nlrp3 Inflammasome Signaling stimulates in the hematopoietic Stem/Progenitor cells lipogenesis to facilitate membrane lipid raft formation | Abdelbaset-Ismail A.; Ciechanowicz A.K. et al. | Stem Cell Reviews and Reports | https://doi.org/10.1007/s12015-022-10481-2 |
| A mass spectrum-oriented computational method for ion mobility-resolved untargeted metabolomics | Luo M.; Yin Y. et al. | Nature Communications | https://doi.org/10.1038/s41467-023-37539-0 |
| Time and dose-dependent impairment of liver metabolism in Gasterosteus aculeatus following exposure to diclofenac (DCF) highlighted by LC-HRMS untargeted metabolomics | Lebeau-Roche E.; Daniele G. et al. | Science of the Total Environment | https://doi.org/10.1016/j.scitotenv.2022.159801 |
| Untargeted metabolomics discriminates grapes and wines from two syrah vineyards located in the same wine region | Baleiras-Couto M.M.; Guedes R. et al. | Fermentation | https://doi.org/10.3390/fermentation9020145 |
| Anti-Hypercholesterolemia Effects of Edible Seaweed Extracts and Metabolomic Changes in Hep-G2 and Caco-2 Cell Lines | Coelho M.; Pacheco R. | Life | https://doi.org/10.3390/life13061325 |
| Untargeted urinary metabolomics for bladder cancer biomarker screening with ultrahigh-resolution mass spectrometry | Nizioł J.; Ossoliński K. et al. | Scientific Reports | https://doi.org/10.1038/s41598-023-36874-y |
| Comparative LC-MS/MS-based molecular networking, DNA fingerprinting, and in vitro anti-Helicobacter pylori activity of three Egyptian Ficus cultivars | Bakry S.M.; Naser A.F.A. et al. | Journal of Pharmaceutical and Biomedical Analysis | https://doi.org/10.1016/j.jpba.2023.115620 |
| Metabolomic analyses uncover an inhibitory effect of niclosamide on mitochondrial membrane potential in cholangiocarcinoma cells | Kulthawatsiri T.; Kittirat Y. et al. | PeerJ | https://doi.org/10.7717/peerj.16512 |
| Segregation of the genus Parahypoxylon (Hypoxylaceae, Xylariales) from Hypoxylon by a polyphasic taxonomic approach | Cedeño-Sanchez M.; Charria-Girón E. et al. | MycoKeys | https://doi.org/10.3897/mycokeys.95.98125 |
| Assessment of Xenoestrogens in Jordanian Water System: Activity and Identification | Akkam Y.; Omari D. et al. | Toxics | https://doi.org/10.3390/toxics11010063 |
| Selected Gut Bacteria from Water Monitor Lizard Exhibit Effects against Pathogenic Acanthamoeba castellanii Belonging to the T4 Genotype | Akbar N.; Khan N.A. et al. | Microorganisms | https://doi.org/10.3390/microorganisms11041072 |
| A comprehensive untargeted metabolomics study in zebrafish embryos exposed to perfluorohexane sulfonate (PFHxS) | Xu M.; Legradi J. et al. | Science of The Total Environment | https://doi.org/10.2139/ssrn.4351067 |
| Quantitative analysis of fatty acids and vitamin E and total lipid profiling of dietary supplements from the German market | Zartmann A.; Völcker L. et al. | European Food Research and Technology | https://doi.org/10.1007/s00217-022-04193-7 |
| Chemical characterization of virgin and recycled polyethylene terephthalate films used for food contact applications | Bhattarai B.; Kusano Y. et al. | European Food Research and Technology | https://doi.org/10.1007/s00217-023-04400-z |
| Amesia hispanica sp. nov., Producer of the Antifungal Class of Antibiotics Dactylfungins | Charria-Girón E.; Stchigel A.M. et al. | Journal of Fungi | https://doi.org/10.3390/jof9040463 |
| Metabolomics insights into the polyketide-lactones produced by Diaporthe caliensis sp. nov., an endophyte of the medicinal plant Otoba gracilipes | Charria-Girón E.; Marin-Felix Y. et al. | Microbiology Spectrum | https://doi.org/10.1128/spectrum.02743-23 |
| Multi-Omics Profiling of Candida albicans Grown on Solid Versus Liquid Media | Alhameed R.A.; Semreen M.H. et al. | Microorganisms | https://doi.org/10.3390/microorganisms11122831 |
| Biodeterioration potential of algae on building materials-Model study | Komar M.; Nowicka-Krawczyk P. et al. | International Biodeterioration & Biodegradation | https://doi.org/10.1016/j.ibiod.2023.105593 |
| A combined liquid chromatography–trapped ion mobility–tandem high-resolution mass spectrometry and multivariate analysis approach for the determination of enzymatic reactivity descriptors in biomass hydrolysates | Ramtanon I.; Berlioz-Barbier A. et al. | Journal of Chromatography A | https://doi.org/10.1016/j.chroma.2023.464277 |
| Infrared Laser-Based Selected Reaction Monitoring Mass Spectrometry Imaging of Banana (Musa spp.) Tissue—New Method for Detection and Spatial Localization of Metabolites in Food | Nizioł J.; Misiorek M. et al. | Food Analytical Methods | https://doi.org/10.1007/s12161-023-02561-x |
| Cultivation of Melilotus officinalis as a source of bioactive compounds in association with soil recovery practices | Nogues I.; Passatore L. et al. | Frontiers in Plant Science | https://doi.org/10.1101/2023.04.24.538143 |
| A retro-inverso modified peptide alleviated ovalbumin-induced asthma model by affecting glycerophospholipid and purine metabolism of immune cells | Ma S.; Yang K. et al. | Pulmonary Pharmacology & Therapeutics | https://doi.org/10.2139/ssrn.4157323 |
| Proteomic and metabolomic signatures of U87 glioblastoma cells treated with cisplatin and/or paclitaxel | Ahmed M.; Semreen A.M. et al. | Annals of Medicine | https://doi.org/10.1080/07853890.2024.2305308 |
| An Integrated Multi-OMICS Approach Highlights Elevated Non-Esterified Fatty Acids Impact BeWo Trophoblast Metabolism and Lipid Processing | Easton Z.J.; Sarr O. et al. | Metabolites | https://doi.org/10.20944/preprints202306.1022.v1 |
| Maize kernel metabolome involved in resistance to fusarium ear rot and fumonisin contamination | Cao A.; Gesteiro N. et al. | Frontiers in Plant Science | https://doi.org/10.3389/fpls.2023.1160092 |
| Signal Response Evaluation Applied to Untargeted Mass Spectrometry Data to Improve Data Interpretability | Overdahl K.E.; Collier J.B. et al. | Journal of the American Society for Mass Spectrometry | https://doi.org/10.1021/jasms.3c00220.s002 |
| Phytochemical profile of petals from black Dahlia pinnata by flow injection analysis–electrospray ionization–Fourier transform ion cyclotron resonance mass spectrometry | Granados‐Balbuena S.Y.; Díaz‐Pacheco A. et al. | Phytochemical Analysis | https://doi.org/10.1002/pca.3268 |
| Pre-symbiotic response of the compatible host spruce and low-compatibility host pine to the ectomycorrhizal fungus Tricholoma vaccinum | Ezediokpu M.N.; Halitschke R. et al. | Frontiers in Microbiology | https://doi.org/10.3389/fmicb.2023.1280485 |
| Evaluation of Two Simultaneous Metabolomic and Proteomic Extraction Protocols Assessed by Ultra-High-Performance Liquid Chromatography Tandem Mass Spectrometry | Zenati R.A.; Giddey A.D. et al. | International Journal of Molecular Sciences | https://doi.org/10.3390/ijms24021354 |
| Transcriptome, proteome and metabolome analysis provide insights on fat deposition and meat quality in pig | Yu T.; Tian X. et al. | Food Research International | https://doi.org/10.1016/j.foodres.2023.112550 |
| Dissecting the effects of paraquat-induced pulmonary injury in rats using UPLC-Q-TOF-MS/MS-based metabonomics | Liu X.; Li C. et al. | Toxicology Research | https://doi.org/10.1093/toxres/tfad040 |
| Biological and chemical contamination of illegal, uncontrolled refuse storage areas in Poland | Szulc J.; Nizioł J. et al. | Environmental Research | https://doi.org/10.1016/j.envres.2023.115825 |
| Evaluating Software Tools for Lipid Identification from Ion Mobility Spectrometry–Mass Spectrometry Lipidomics Data | Ross D.H.; Guo J. et al. | Molecules | https://doi.org/10.3390/molecules28083483 |
| Toxicological effects of cyanobacterial metabolites on zebrafish larval development | Jacinavicius F.R.; Geraldes V. et al. | Harmful Algae | https://doi.org/10.1016/j.hal.2023.102430 |
| Discriminative Metabolomics Analysis and Cytotoxic Evaluation of Flowers, Leaves, and Roots Extracts of Matthiola longipetala subsp. livida | Marzouk M.M.; Hegazi N.M. et al. | Metabolites | https://doi.org/10.3390/metabo13080909 |
| Supramolecular solvent extraction and ambient mass spectrometry for the determination of organic contaminants in food packaging material | Mas M.J.D.; de Dios-Pérez C. et al. | Chemosphere | https://doi.org/10.2139/ssrn.4356533 |
| Four-dimensional trapped ion mobility spectrometry lipidomics for high throughput clinical profiling of human blood samples | Lerner R.; Baker D. et al. | Nature Communications | https://doi.org/10.1038/s41467-023-36520-1 |
| Development of fish liver PLHC-1 spheroids and its applicability to investigate the toxicity of plastic additives | Wang T.; Desmet J. et al. | Ecotoxicology and environmental safety | https://doi.org/10.1016/j.ecoenv.2023.115016 |
| Comparison of nocturnal and diurnal metabolomes of rose flowers and leaves | Zumsteg J.; Bossard E. et al. | Metabolomics | https://doi.org/10.1007/s11306-023-02063-1 |
| Integrated plasma metabolomics and lipidomics profiling highlights distinctive signature of hepatocellular carcinoma in HCV patients | Caponigro V.; Tornesello A.L. et al. | Journal of Translational Medicine | https://doi.org/10.1186/s12967-023-04801-4 |
| Serum metabolomic profiling reveals potential biomarkers in systemic sclerosis | Guo M.; Liu D. et al. | Metabolism | https://doi.org/10.1016/j.metabol.2023.155587 |
| Identifying antimicrobials and their metabolites in wastewater and surface water with effect-directed analysis | Jonkers T.J.; Keizers P.H. et al. | Chemosphere | https://doi.org/10.1016/j.chemosphere.2023.138093 |
| Must protection, sulfites versus bioprotection: A metabolomic study | Lebleux M.; Alexandre H. et al. | Food Research International | https://doi.org/10.1016/j.foodres.2023.113383 |
| From sugarcane to skin: Lignin as a multifunctional ingredient for cosmetic application | Antunes F.; Mota I.F. et al. | International Journal of Biological Macromolecules | https://doi.org/10.1016/j.ijbiomac.2023.123592 |
| Metabolomic fingerprint of cabbage resistance to Mamestra brassicae L.(Lepidoptera: Noctuidae) | Rodriguez V.M.; Velasco P. et al. | Pest management science | https://doi.org/10.1002/ps.7242 |
| Identification of colupulone and lupulone as the main contributors to the antibacterial activity of hop extracts using activity-guided fractionation and metabolome analysis | Li Y.; Dalabasmaz S. et al. | Food Research International | https://doi.org/10.1016/j.foodres.2023.112832 |
| Phenolic acids-rich fraction from Ficus drupacea leaves for the prevention and treatment of ethanol-induced gastric mucosal injury in rats | Bakry S.M.; Naser A.F.A. et al. | Inflammopharmacology | https://doi.org/10.1007/s10787-023-01158-4 |
| Green Nanotechnology of Yucca filamentosa-Phytochemicals-Functionalized Gold Nanoparticles—Antitumor Efficacy Against Prostate and Breast Cancers | Thipe V.C.; Jatar A. et al. | Nanotechnology, Science and Applications | https://doi.org/10.2147/nsa.s437812 |
| Sub-5-min RP-UHPLC-TIMS for high-throughput untargeted lipidomics and its application to multiple matrices | Merciai F.; Basilicata M.G. et al. | Analytical and Bioanalytical Chemistry | https://doi.org/10.1007/s00216-023-05084-w |
| Antimony Compounds Associate with Atopic Dermatitis and Influence Models of Itch and Dysbiosis | Zeldin J.; Tran T.T. et al. | Environmental Science & Technology Letters | https://doi.org/10.1021/acs.estlett.3c00142.s001 |
| Unveiling plant defense arsenal: metabolic strategies in Brassica oleracea during black rot disease | Vega-Álvarez C.; Soengas P. et al. | Horticulture Research | https://doi.org/10.1093/hr/uhad204 |
| Berberis microphylla G. Forst Intake Reduces the Cardiovascular Disease Plasmatic Markers Associated with a High-Fat Diet in a Mice Model | Olivares-Caro L.; Nova-Baza D. et al. | Antioxidants | https://doi.org/10.3390/antiox12020304 |
| First Description of Non-Enzymatic Radical-Generating Mechanisms Adopted by Fomitiporia mediterranea: An Unexplored Pathway of the White Rot Agent of the Esca Complex of Diseases | Moretti S.; Goddard M. et al. | Journal of Fungi | https://doi.org/10.3390/jof9040498 |
| Phytochemical Analysis and Antiproliferative Activity of Ulex gallii Planch.(Fabaceae), a Medicinal Plant from Galicia (Spain) | Bada L.; Pereira R.B. et al. | Molecules | https://doi.org/10.3390/molecules28010351 |
| Omic Studies on the Effect of Fucus vesiculosus on Differentiated Caco-2 Cells: A Potential Functional Food | André R.; Pacheco R. et al. | https://doi.org/10.20944/preprints202305.1819.v1 | |
| Disruption of fish gut microbiota composition and holobiont’s metabolome during a simulated Microcystis aeruginosa (Cyanobacteria) bloom | Gallet A.; Halary S. et al. | Microbiome | https://doi.org/10.1186/s40168-023-01558-2 |
| Attenuation and soil biodegradation of fungicides by using vegetated buffer strips in vineyards during a simulated rainfall–runoff event | Ortega P.; Escolà Casas M. et al. | Environmental Science and Pollution Research | https://doi.org/10.1007/s11356-023-27766-9 |
| Identification of antimicrobial and glucocorticoid compounds in wastewater effluents with effect-directed analysis | Jonkers T.J.; Houtman C.J. et al. | Environmental Research | https://doi.org/10.2139/ssrn.4283611 |
| Supramolecular-solvent based extraction of hydroxytyrosol from brines of the processing of table olives | Ballesteros-Gómez A.; Serrano-Crespín A. et al. | Separation and Purification Technology | https://doi.org/10.1016/j.seppur.2023.124351 |
| Mass spectrometric analysis of bioactive conditioned media of bacteria isolated from reptilian gut | Siddiqui R.; Akbar N. et al. | Future Science OA | https://doi.org/10.2144/fsoa-2023-0030 |
| Dynamic changes of serum metabolite profiling in septic mice based on high performance liquid chromatography of quadrupole time of flight mass spectrometry analysis | Li S.; Zeng Q. et al. | European Journal of Mass Spectrometry | https://doi.org/10.1021/ac061037q.s001 |
| High-Resolution Mass Spectrometry-Based Metabolomics for Increased Grape Juice Metabolite Coverage | Nicolas S.; Bois B. et al. | Foods | https://doi.org/10.3390/foods13010054 |
| Uncovering the secrets of monoculture yield decline: trade‐offs between leaf and root chemical and physical defence traits in a grassland experiment | Bassi L.; Hennecke J. et al. | Oikos | https://doi.org/10.1111/oik.10061 |
| First study on the root endophytic fungus Trichoderma hamatum as an entomopathogen: Development of a fungal bioinsecticide against cotton leafworm (Spodoptera littoralis) | Lana M.; Simón O. et al. | Microbiological Research | https://doi.org/10.1016/j.micres.2023.127334 |
| Bioprotection Efficiency of Metschnikowia Strains in Synthetic Must: Comparative Study and Metabolomic Investigation of the Mechanisms Involved | Puyo M.; Mas P. et al. | Foods | https://doi.org/10.3390/foods12213927 |
| Thiamine and Biotin: Relevance in the Production of Volatile and Non-Volatile Compounds during Saccharomyces cerevisiae Alcoholic Fermentation in Synthetic Grape Must | Evers M.S.; Roullier-Gall C. et al. | Foods | https://doi.org/10.3390/foods12050972 |
| Plasma metabolomics profiling identifies new predictive biomarkers for disease severity in COVID-19 patients | Soares N.C.; Hussein A. et al. | Plos one | https://doi.org/10.1371/journal.pone.0289738 |
| Automatization of metabolite extraction for high-throughput metabolomics: case study on transgenic isoprene-emitting birch | Bertić M.; Zimmer I. et al. | Tree Physiology | https://doi.org/10.1093/treephys/tpad087 |
| Metabolomic analysis of the inhibitory effect of phthalates and bisphenol A on the antioxidant activity of vitamin D in human samples using liquid chromatography–mass spectrometry | Lee J.H.; Gwon M. et al. | Journal of Chromatography B | https://doi.org/10.1016/j.jchromb.2023.123687 |
| Experimental evidence and clinical implications of Warburg effect in the skeletal muscle of Fabry disease | Gambardella J.; Fiordelisi A. et al. | Iscience | https://doi.org/10.1097/01.hjh.0000942136.96371.eb |
| Mass spectrometry-based metabolomics approach and in vitro assays revealed promising role of 2, 3-dihydroquinazolin-4 (1H)-one derivatives against colorectal cancer cell lines | Dahabiyeh L.A.; Hudaib F. et al. | European Journal of Pharmaceutical Sciences | https://doi.org/10.1016/j.ejps.2023.106378 |
| Burkholderia pseudomallei biofilm resists Acanthamoeba sp. grazing and produces 8-O-4′-diferulic acid, a superoxide scavenging metabolite after passage through the amoeba | Bunma C.; Noinarin P. et al. | Scientific Reports | https://doi.org/10.1038/s41598-023-43824-1 |
| Dehydroepiandrosterone supplementation and the impact of follicular fluid metabolome and cytokinome profiles in poor ovarian responders | Viardot-Foucault V.; Zhou J. et al. | Journal of Ovarian Research | https://doi.org/10.21203/rs.3.rs-1314035/v1 |
| Insight into the mechanisms of therapeutic hypothermia for asphyxia cardiac arrest using a comprehensive approach of GC-MS/MS and UPLC-Q-TOF-MS/MS based on serum metabolomics | Zhang Y.; Feng Y. et al. | Heliyon | https://doi.org/10.1016/j.heliyon.2023.e16247 |
| Influence of spontaneous,“pied de cuve” and commercial dry Yeast fermentation strategies on wine molecular composition and sensory properties | Álvarez-Barragán J.; Mallard J. et al. | Food Research International | https://doi.org/10.1016/j.foodres.2023.113648 |
| Lipidomics based on liquid chromatography‐high resolution mass spectrometry reveals the protective role of peroxisome proliferator‐activated receptor alpha on kidney stone formation in mice treated with glyoxylate | Chao Y.; Li N. et al. | Journal of Separation Science | https://doi.org/10.1002/jssc.202300452 |
| How do barley plants with impaired photosynthetic light acclimation survive under high-light stress? | Saeid Nia M.; Scholz L. et al. | Planta | https://doi.org/10.1007/s00425-023-04227-8 |
| Anticancer activity and metabolic alteration in colon and prostate cancer cells by novel moxifloxacin conjugates with fatty acids | Chrzanowska A.; Kurpios-Piec D. et al. | European Journal of Pharmacology | https://doi.org/10.1016/j.ejphar.2022.175481 |
| Physical activity‐induced alterations of the gut microbiota are BMI dependent | Shah S.; Mu C. et al. | The FASEB Journal | https://doi.org/10.1096/fj.202201571r |
| Leaf and root chemical and physical defence traits mediate monoculture yield decline in a grassland experiment | Bassi L.; Hennecke J. et al. | Authorea | https://doi.org/10.22541/au.167751569.90939710/v1 |
| Plant metabolites modulate animal social networks and lifespan | Singh P.; Brueggemann L. et al. | bioRxiv | https://doi.org/10.1101/2023.12.20.572488 |
| Crude Extracts of Talaromyces Strains (Ascomycota) Affect Honey Bee (Apis mellifera) Resistance to Chronic Bee Paralysis Virus | Vocadlova K.; Lamp B. et al. | Viruses | https://doi.org/10.3390/v15020343 |
| Mechanistic insights into the biological activity of S-Sulfocysteine in CHO cells using a multi-omics approach | Nguyen M.; Le Mignon M. et al. | Frontiers in Bioengineering and Biotechnology | https://doi.org/10.3389/fbioe.2023.1230422 |
| Nonpolar Lipids Contribute to Midday Fogging During Scleral Lens Wear | Walker M.K.; Bailey L.S. et al. | Investigative Ophthalmology & Visual Science | https://doi.org/10.1167/iovs.64.1.7 |
| Population divergence in heat and drought responses of a coastal plant: from metabolic phenotypes to plant morphology and growth | Schrieber K.; Gluesing S. et al. | Journal of Experimental Botany | https://doi.org/10.1093/jxb/erad147 |
| Meta-metabolomic Responses of River Biofilms to Cobalt Exposure and Use of Dose-response Model Trends as an Indicator of Effects | Colas S.; Marie B. et al. | bioRxiv | https://doi.org/10.1101/2023.06.19.545533 |
| Melatonin reduces pink rib discoloration in wounded lettuce midribs | Belisle C.E.; Sargent S.A. et al. | Postharvest Biology and Technology | https://doi.org/10.1016/j.postharvbio.2023.112307 |
| Metabolome expression in Eucryphia cordifolia populations: Role of seasonality and ecological niche centrality hypothesis | Fuica-Carrasco C.; Toro-Núñez Ó. et al. | Journal of Plant Research | https://doi.org/10.1007/s10265-023-01489-x |
| Ultra-High-Resolution Liquid Chromatography Coupled with Electrospray Ionization Quadrupole Time-of-Flight Mass Spectrometry Analysis of Tessaria absinthioides (Hook. & Arn.) DC.(Asteraceae) and Antioxidant and Hypocholesterolemic Properties | Rey M.; Kruse M.S. et al. | Antioxidants | https://doi.org/10.3390/antiox13010050 |
| A palmitate-rich metastatic niche enables metastasis growth via p65 acetylation resulting in pro-metastatic NF-κB signaling | Altea-Manzano P.; Doglioni G. et al. | Nature Cancer | https://doi.org/10.1038/s43018-023-00513-2 |
| European oak metabolites shape digestion and fitness of the herbivore Tortrix viridana | Bertić M.; Orgel F. et al. | Functional Ecology | https://doi.org/10.22541/au.165400033.37684939/v1 |
| Repair of airway epithelia requires metabolic rewiring towards fatty acid oxidation | Crotta S.; Villa M. et al. | Nature Communications | https://doi.org/10.1038/s41467-023-36352-z |
| Molecular Signatures of the Eagle Effect Induced by the Artificial Siderophore Conjugate LP-600 in E. coli | Lai Y.; Franke R. et al. | ACS Infectious Diseases | https://doi.org/10.1021/acsinfecdis.2c00567.s002 |
| Multi-omics analysis of Bacillus. subtilis spores formed at different environmental temperatures reveal differences at the morphological and molecular level. | Huang Y.; Roseboom W. et al. | bioRxiv | https://doi.org/10.1101/2023.06.22.546136 |
| A Prospective Analysis of the Metyrapone Short Test Using Targeted and Untargeted Metabolomics | Seoudy A.K.; Schlicht K. et al. | Neuroendocrinology | https://doi.org/10.1159/000529146 |
| Disturbed Plasma Lipidomic Profiles in Females with Diffuse Large B-Cell Lymphoma: A Pilot Study | Masnikosa R.; Pirić D. et al. | Cancers | https://doi.org/10.3390/cancers15143653 |
| Metabolite alterations in zebrafish embryos exposed to hydroxylated polybrominated diphenyl ethers | Gustafsson J.; Legradi J. et al. | Science of the Total Environment | https://doi.org/10.1016/j.scitotenv.2022.159269 |
| Integrated multi‐omics analysis reveals unique signatures of paclitaxel‐loaded poly (lactide‐co‐glycolide) nanoparticles treatment of head and neck cancer cells | Haider M.; Jagal J. et al. | Proteomics | https://doi.org/10.1002/pmic.202200380 |
| Evaluation and Comparison of Dermo-Cosmetic Activities of Three Oak Species by Targeting Antioxidant Metabolites and Skin Enzyme Inhibitors | Buche G.; Laffon M. et al. | Metabolites | https://doi.org/10.3390/metabo13070804 |
| Unravelling the Phytotoxic Effects of Glyphosate on Sensitive and Resistant Amaranthus palmeri Populations by GC–MS and LC–MS Metabolic Profiling | Zulet-Gonzalez A.; Gorzolka K. et al. | Plants | https://doi.org/10.3390/plants12061345 |
| Impact of electrolyte decomposition products on the electrochemical performance of 4 V class K-ion batteries | Hosaka T.; Matsuyama T. et al. | Chemical Science | https://doi.org/10.1039/d3sc02111d/v1/review1 |
| Bioprospecting a Film-Forming System Loaded with Eugenia uniflora L. and Tropaeolum majus L. Leaf Extracts for Topical Application in Treating Skin Lesions | Dalmagro M.; Pinc M.M. et al. | Pharmaceuticals | https://doi.org/10.3390/ph16081068 |
| Effects of medwakh smoking on salivary metabolomics and its association with altered oral redox homeostasis among youth | Aghila Rani K.; Soares N.C. et al. | Scientific Reports | https://doi.org/10.1038/s41598-023-27958-w |
| Metabolic engineering of p‐hydroxybenzoate in poplar lignin | Mottiar Y.; Karlen S.D. et al. | Plant Biotechnology Journal | https://doi.org/10.1111/pbi.13935 |
| Structure Elucidation and Biosynthesis of Nannosterols A and B, Myxobacterial Sterols from Nannocystis sp. MNa10993 | Akone S.H.; Hug J.J. et al. | Journal of Natural Products | https://doi.org/10.1021/acs.jnatprod.2c01143.s003 |
| Illuminating the oral microbiome and its host interactions: recent advancements in omics and bioinformatics technologies in the context of oral microbiome research | Baker J.L. | FEMS Microbiology Reviews | https://doi.org/10.1093/femsre/fuad051 |
| Distinct metabolite classes in root exudates are indicative for field-or hydroponically-grown cover crops | Heuermann D.; Döll S. et al. | Frontiers in Plant Science | https://doi.org/10.3389/fpls.2023.1122285 |
| Blue‐green fluorescence during hypersensitive cell death arises from phenylpropanoid deydrodimers | Kanawati B.; Bertic M. et al. | Plant Direct | https://doi.org/10.1002/pld3.531 |
| Both age and social environment shape the phenotype of ant workers | Quque M.; Brun C. et al. | Scientific Reports | https://doi.org/10.1101/2022.06.13.495886 |
| Analytical approaches for screening of per-and poly fluoroalkyl substances in food items: A review of recent advances and improvements | Ogunbiyi O.D.; Ajiboye T.O. et al. | Environmental Pollution | https://doi.org/10.1016/j.envpol.2023.121705 |
| Untargeted metabolomics analysis of four date palm (Phoenix dactylifera L.) cultivars using MS and NMR | Alsuhaymi S.; Singh U. et al. | Natural Products and Bioprospecting | https://doi.org/10.1007/s13659-023-00406-y |
| Defining atherosclerotic plaque biology by mass spectrometry-based omics approaches | Chandran M.; Sudhina S. et al. | Molecular Omics | https://doi.org/10.1039/d2mo00260d |
| GC× GC and computational strategies for detecting and analyzing environmental contaminants | Ieda T.; Hashimoto S. | TrAC Trends in Analytical Chemistry | https://doi.org/10.1016/j.trac.2023.117118 |
| Multi-Omics Analysis of Circulating Exosomes in Adherent Long-Term Treated OSA Patients | Khalyfa A.; Marin J.M. et al. | International Journal of Molecular Sciences | https://doi.org/10.3390/ijms242216074 |
| Data‐Driven Compound Identification in Atmospheric Mass Spectrometry | Sandström H.; Rissanen M. et al. | Advanced Science | https://doi.org/10.1002/advs.202306235 |
| Phosphoinositide acyl chain saturation drives CD8+ effector T cell signaling and function | Edwards-Hicks J.; Apostolova P. et al. | Nature Immunology | https://doi.org/10.1038/s41590-023-01419-y |
| Phytochemical Profiling, Antioxidant and Tyrosinase Regulatory Activities of Extracts from Herb, Leaf and In Vitro Culture of Achillea millefolium (Yarrow) | Czech K.; Gaweł-Bęben K. et al. | Molecules | https://doi.org/10.3390/molecules28124791 |
| Molecular networking as a natural products discovery strategy | Zhang M.; Otsuki K. et al. | Acta Materia Medica | https://doi.org/10.15212/amm-2023-0007 |
| The stability of the myelinating oligodendrocyte transcriptome is regulated by the nuclear lamina | Pruvost M.; Patzig J. et al. | Cell reports | https://doi.org/10.1016/j.celrep.2023.112848 |
| Serum metabolomic analyses reveal the potential metabolic biomarkers for prediction of amatoxin poisoning | Liu Y.; Li S. et al. | Toxicon | https://doi.org/10.1016/j.toxicon.2023.107153 |
| An Exploratory Study of the Metabolite Profiling from Pesticides Exposed Workers | Nolasco D.M.; Mendes M.P. et al. | Metabolites | https://doi.org/10.3390/metabo13050596 |
MetaboScape® Bibliography 2022
| Title | Author | Publication | Link |
|---|---|---|---|
| Multi-Omics Analysis Revealed a Significant Alteration of Critical Metabolic Pathways Due to Sorafenib-Resistance in Hep3B Cell Lines | Abushawish K.Y.I.; Soliman S.S.M. et al. | 2022 Int. J. Mol. Sci. | https://doi.org/10.3390/ijms231911975 |
| Untargeted Metabolomics of Breast Cancer Cells MCF-7 and SkBr3 Treated With Tamoxifen/Trastuzumab | Sharaf B.M.; Giddey A.D. et al. | 2022 Cancer Genomics & Proteomics | https://doi.org/10.21873/cgp.20305 |
| Untargeted lipidomics reveals specific lipid profiles in COVID-19 patients with different severity from Campania region (Italy) | Ciccarelli M.; Merciai F. et al. | 2022 J. Pharm. Bio. Anal. | https://doi.org/10.1016/j.jpba.2022.114827 |
| Development and application of a fast ultra-high performance liquid chromatography-trapped ion mobility mass spectrometry method for untargeted lipidomics | Merciai F.; Musella S. et al. | 2022 J Chrom A | https://doi.org/10.1016/j.chroma.2022.463124 |
| Untargeted ultra‑high‑resolution mass spectrometry metabolomic profiling of blood serum in bladder cancer | Nizioł J.; Ossoliński K. et al. | 2022 Nature Scientific Reports | https://doi.org/10.1038/s41598-022-19576-9 |
| Untargeted Metabolomic Plasma Profiling of Emirati Dialysis Patients with Diabetes versus Non-Diabetic: A Pilot Study | Banimfreg B.H.; Alshraideh H. et al. | 2022 Biomolecules | https://www.mdpi.com/2218-273X/12/7/962 |
| Impact of Skin Tissue Collection Method on Downstream MALDI-Imaging | Yadav M.; Chaudhary P.P. et al. | 2022 Metabolites | https://doi.org/10.3390/metabo12060497 |
| Thorough Investigation of the Phenolic Profile of Reputable Greek Honey Varieties: Varietal Discrimination and Floral Markers Identification Using Liquid Chromatography–High-Resolution Mass Spectrometry | Koulis G.A.; Tsagkaris A.S. et al. | 2022 Molecules | https://doi.org/10.3390/molecules27144444 |
| Structural amyloid plaque polymorphism is associated with distinct lipid accumulations revealed by trapped ion mobility mass spectrometry imaging | Michno W.; Wherli P.M. et al. | 2022 J of Neurochemistry | https://doi.org/10.1111/jnc.15557 |
| Bioprospecting the Metabolome of Plant Urtica dioica L.: A Fast Dereplication and Annotation Workflow in Plant Metabolomics | Bhattarai K.; Paudel B. et al. | 2022 Evidence-Based Complementary and Alternative Medicine | https://doi.org/10.1155/2022/3710791 |
| Spatially resolved characterization of tissue metabolic compartments in fasted and high-fat diet livers | Stopka S.A.; van der Reest J. et al. | 2022 PLoS One | https://doi.org/10.1371/journal.pone.0261803 |
| Analysis and Comparison of Mouse and Human Brain Gangliosides via Two-Stage Matching of MS/MS Spectra | Huang F.; Bailey L.S. et al. | 2022 ACS Omega | https://doi.org/10.1021/acsomega.1c07070 |
| Non-Targeted Serum Lipidomics Analysis and Potential Biomarkers of Laryngeal Cancer Based on UHPLC-QTOF-MS | Wang H.; Luo Y. et al. | 2022 Metabolites | https://doi.org/10.3390/metabo12111087 |
| Metabolism Reorganization in Kale (Brassica oleracea L. var acephala) Populations with Divergent Glucosinolate Content under Thermal Stresses | Díaz-Urbano M.; Velasco P. et al. | 2022 Agronomy | https://doi.org/10.3390/agronomy12112652 |
| Spatially resolved characterization of tissue metabolic compartments in fasted and high-fat diet livers | Stopka S.A.; van der Reest J. et al. | Plos one | https://doi.org/10.1371/journal.pone.0261803 |
| MALDI Mass Spectrometry Imaging highlights specific metabolome and lipidome profiles in salivary gland tumor tissues | Sommella E.; Salviati E. et al. | Metabolites | https://doi.org/10.3390/metabo12060530 |
| Spatially Resolved Metabolites in Stable and Vulnerable Human Atherosclerotic Plaques Identified by Mass Spectrometry Imaging | Seeley E.H.; Liu Z. et al. | bioRxiv | https://doi.org/10.1161/atvb.42.suppl_1.441 |
| Structural amyloid plaque polymorphism is associated with distinct lipid accumulations revealed by trapped ion mobility mass spectrometry imaging | Michno W.; Wehrli P.M. et al. | Journal of Neurochemistry | https://doi.org/10.33774/chemrxiv-2021-w1470 |
| Impact of Skin Tissue Collection Method on Downstream MALDI-Imaging | Yadav M.; Chaudhary P.P. et al. | Metabolites | https://doi.org/10.3390/metabo12060497 |
| Untargeted ultra-high-resolution mass spectrometry metabolomic profiling of blood serum in bladder cancer | Nizioł J.; Ossoliński K. et al. | Scientific Reports | https://doi.org/10.21203/rs.3.rs-1750599/v1 |
| Development of approach for flavonoid profiling of biotechnological raw materials Iris sibirica L. by HPLC with high‐resolution tandem mass spectrometry | Karpitskiy D.A.; Bessonova E.A. et al. | Phytochemical Analysis | https://doi.org/10.1002/pca.3135 |
| Untargeted metabolomics of breast cancer cells MCF-7 and SkBr3 treated with tamoxifen/trastuzumab | Sharaf B.M.; Giddey A.D. et al. | Cancer Genomics & Proteomics | https://doi.org/10.21873/cgp.20305 |
| Untargeted metabolomic plasma profiling of emirati dialysis patients with diabetes versus non-diabetic: A pilot study | Banimfreg B.H.; Alshraideh H. et al. | Biomolecules | https://doi.org/10.3390/biom12070962 |
| Microbiota independent effects of oligosaccharides on Caco-2 cells-A semi-targeted metabolomics approach using DI-FT-ICR-MS coupled with pathway enrichment analysis | Jensen-Kroll J.; Demetrowitsch T. et al. | Frontiers in molecular biosciences | https://doi.org/10.3389/fmolb.2022.968643 |
| Constitutive and inducible defense in Eucalyptus determines the feeding host of Gonipterus platensis, denoting specific plant-insect coevolution and a strategy for resistance improvement | Campos J.V.; Riquelme S. et al. | Industrial Crops and Products | https://doi.org/10.1016/j.indcrop.2022.115811 |
| Untargeted approach to investigating the metabolomics profile of type 2 diabetes emiratis | Banimfreg B.H.; Shamayleh A. et al. | Journal of Proteomics | https://doi.org/10.1016/j.jprot.2022.104718 |
| Saliva metabolomic profile of COVID-19 patients associates with disease severity | Saheb Sharif-Askari N.; Soares N.C. et al. | Metabolomics | https://doi.org/10.1007/s11306-022-01936-1 |
| Bioprospecting the metabolome of plant Urtica dioica L.: a fast dereplication and annotation workflow in plant metabolomics | Bhattarai K.; Paudel B. et al. | Evidence-Based Complementary and Alternative Medicine | https://doi.org/10.1155/2022/3710791 |
| Thorough investigation of the phenolic profile of reputable greek honey varieties: varietal discrimination and floral markers identification using liquid chromatography–high-resolution mass spectrometry | Koulis G.A.; Tsagkaris A.S. et al. | Molecules | https://doi.org/10.3390/molecules27144444 |
| Mass spectroscopy-based proteomics and metabolomics analysis of triple-positive breast cancer cells treated with tamoxifen and/or trastuzumab | Sharaf B.M.; Giddey A.D. et al. | Cancer Chemotherapy and Pharmacology | https://doi.org/10.1007/s00280-022-04478-4 |
| Non-targeted serum Lipidomics Analysis and potential biomarkers of Laryngeal Cancer based on UHPLC-QTOF-MS | Wang H.; Luo Y. et al. | Metabolites | https://doi.org/10.3390/metabo12111087 |
| Release of Small Phenolic Metabolites from Isotopically Labeled 13C Lignin in the Pig Cecum Model | Kasimir M.; Behrens M. et al. | Journal of Agricultural and Food Chemistry | https://doi.org/10.1021/acs.jafc.2c02836 |
| Analysis and Comparison of Mouse and Human Brain Gangliosides via Two-Stage Matching of MS/MS Spectra | Huang F.; Bailey L.S. et al. | ACS omega | https://doi.org/10.1021/acsomega.1c07070.s001 |
| Microbiota independent effects of oligosaccharides on Caco-2 cells -A semi-targeted metabolomics approach using DI-FT-ICR-MS coupled with pathway enrichment analysis | Jensen-Kroll J.; Demetrowitsch T. | Frontiers in molecular biosciences | https://doi.org/10.3389/fmolb.2022.968643 |
| Metabolomic Study of Urine from Workers Exposed to Low Concentrations of Benzene by UHPLC-ESI-QToF-MS Reveals Potential Biomarkers Associated with Oxidative Stress and Genotoxicity | Mendes M.P.; Paiva M.J.N. et al. | Metabolites | https://doi.org/10.3390/metabo12100978 |
| Metabolism Reorganization in Kale (Brassica oleracea L. var acephala) Populations with Divergent Glucosinolate Content under Thermal Stresses | Díaz-Urbano M.; Velasco P. et al. | Agronomy | https://doi.org/10.3390/agronomy12112652 |
| Tree species richness differentially affects the chemical composition of leaves, roots and root exudates in four subtropical tree species | Weinhold A.; Döll S. et al. | Journal of Ecology | https://doi.org/10.1111/1365-2745.13777/v2/review1 |
| IVS I-5 (G> C) is associated with changes to the RBC membrane lipidome in response to hydroxyurea treatment in β-thalassemia patients | Khan M.B.N.; Iftikhar F. et al. | Molecular Omics | https://doi.org/10.1039/d2mo00008c |
| Integrated multi-omic analysis of fruit maturity identifies biomarkers with drastic abundance shifts spanning the harvest period in ‘Royal Gala’apple | Favre L.; Hunter D.A. et al. | Postharvest Biology and Technology | https://doi.org/10.1016/j.postharvbio.2022.112059 |
| Trapped ion mobility spectrometry-mass spectrometry improves the coverage and accuracy of four-dimensional untargeted lipidomics | Chen X.; Yin Y. et al. | Analytica Chimica Acta | https://doi.org/10.1016/j.aca.2022.339886 |
| A dietary carbohydrate–gut Parasutterella–human fatty acid biosynthesis metabolic axis in obesity and type 2 diabetes | Henneke L.; Schlicht K. et al. | Gut microbes | https://doi.org/10.1055/s-0042-1746345 |
| Multi-omics analysis revealed a significant alteration of critical metabolic pathways due to sorafenib-resistance in Hep3b cell lines | Abushawish K.Y.; Soliman S.S. et al. | International Journal of Molecular Sciences | https://doi.org/10.3390/ijms231911975 |
| XMN polymorphism along with HU administration renders alterations to RBC membrane lipidome in β-thalassemia patients | Khan M.B.N.; Iftikhar F. et al. | Chemistry and Physics of Lipids | https://doi.org/10.1016/j.chemphyslip.2022.105195 |
| Application of a hybrid zwitterionic hydrophilic interaction liquid chromatography column in metabolic profiling studies | Lioupi A.; Virgiliou C. et al. | Journal of Chromatography A | https://doi.org/10.1016/j.chroma.2022.463013 |
| Elucidating the mechanism behind and investigating the efficacy of Traditional Chinese Medicine and Traditional Tibetan Medicine in combination with standard therapeutics in hepatocellular carcinoma and cholangiocarcinoma in vitro | Suo H.; Hochnadel I. et al. | Frontiers in Pharmacology | https://doi.org/10.3389/fphar.2022.906468 |
| In vivo characterization of key iridoid biosynthesis pathway genes in catnip (Nepeta cataria) | Palmer L.; Chuang L. et al. | Planta | https://doi.org/10.1007/s00425-022-04012-z |
| Graph Properties of Mass-Difference Networks for Profiling and Discrimination in Untargeted Metabolomics | Traquete F.; Luz J. et al. | Frontiers in Molecular Biosciences | https://doi.org/10.3389/fmolb.2022.917911 |
| DEIMoS: an open-source tool for processing high-dimensional mass spectrometry data | Colby S.M.; Chang C.H. et al. | Analytical Chemistry | https://doi.org/10.1021/acs.analchem.1c05017.s001 |
| Plant responses underlying timely specialized metabolites induction of Brassica crops | Doghri M.; Rodríguez V.M. et al. | Frontiers in Plant Science | https://doi.org/10.3389/fpls.2021.807710 |
| MetEx: A Targeted Extraction Strategy for Improving the Coverage and Accuracy of Metabolite Annotation in Liquid Chromatography–High-Resolution Mass Spectrometry Data | Zheng F.; You L. et al. | Analytical Chemistry | https://doi.org/10.1021/acs.analchem.1c04783 |
| Nematode-induced variations in phloem metabolome affecting aphid performance aboveground | Leonar A.L. | Phytochemistry | https://doi.org/10.1016/j.phytochem.2018.11.018 |
| Discovery, Biosynthesis and Biological Activity of a Succinylated Myxochelin from the Myxobacterial Strain MSr12020 | Okoth D.A.; Hug J.J. et al. | Microorganisms | https://doi.org/10.20944/preprints202209.0147.v1 |
| Metabolic profiling as a powerful tool for the analysis of cellular alterations caused by 20 mycotoxins in HepG2 cells | Gerdemann A.; Behrens M. et al. | Archives of toxicology | https://doi.org/10.1007/s00204-022-03348-5 |
| Crithmum maritimum seeds, a potential source for high-quality oil and phenolic compounds in soils with no agronomical relevance | Martins-Noguerol R.; Perez-Ramos I.M. et al. | Journal of Food Composition and Analysis | https://doi.org/10.1016/j.jfca.2022.104413 |
| Comparative anticancer potentials of taxifolin and quercetin methylated derivatives against HCT-116 cell lines: effects of O-methylation on taxifolin and quercetin as preliminary natural leads | Mohammed H.A.; Almahmoud S.A. et al. | ACS omega | https://doi.org/10.1021/acsomega.2c05565.s001 |
| Integrated analysis of plasma and urine reveals unique metabolomic profiles in idiopathic inflammatory myopathies subtypes | Liu D.; Zhao L. et al. | Journal of Cachexia, Sarcopenia and Muscle | https://doi.org/10.1002/jcsm.13045 |
| Metabolomic profiling identifies biomarkers and metabolic impacts of surgery for colorectal cancer | Zhuang F.; Bai X. et al. | Frontiers in Surgery | https://doi.org/10.3389/fsurg.2022.913967 |
| Sirex noctilio infestation led to inevitable pine death despite activating pathways involved in tolerance | Riquelme S.; Campos J.V. et al. | Phytochemistry | https://doi.org/10.1016/j.phytochem.2022.113350 |
| Metabolomics Analysis Revealed Significant Metabolic Changes in Brain Cancer Cells Treated with Paclitaxel and/or Etoposide | Semreen A.M.; Alsoud L.O. et al. | International Journal of Molecular Sciences | https://doi.org/10.3390/ijms232213940 |
| High-Performance data processing workflow incorporating effect-directed analysis for feature prioritization in suspect and nontarget screening | Jonkers T.J.; Meijer J. et al. | Environmental Science & Technology | https://doi.org/10.1021/acs.est.1c04168.s001 |
| Untargeted lipidomics reveals specific lipid profiles in COVID-19 patients with different severity from Campania region (Italy) | Ciccarelli M.; Merciai F. et al. | Journal of Pharmaceutical and Biomedical Analysis | https://doi.org/10.1016/j.jpba.2022.114827 |
| Assessment of Physicochemical, Microbiological and Toxicological Hazards at an Illegal Landfill in Central Poland | Szulc J.; Okrasa M. et al. | International journal of environmental research and public health | https://doi.org/10.3390/ijerph19084826 |
| Characterizing the degradation of cannabidiol in an e-liquid formulation | Schwarzenberg A.; Carpenter H. et al. | Scientific Reports | https://doi.org/10.1038/s41598-022-23910-6 |
| Data Analysis Strategies in CE–MS for Metabolomics | Drouin N.; Boccard J. et al. | Capillary Electrophoresis‐Mass Spectrometry for Proteomics and Metabolomics: Principles and Applications | https://doi.org/10.1002/9783527833092.ch2 |
| Mixed-mode chromatography-mass spectrometry enables targeted and untargeted screening of carboxylic acids in biological samples | Hodek O.; Argemi-Muntadas L. et al. | Analytical Methods | https://doi.org/10.1039/d1ay02143e |
| Optimization of the sulfo-phospho-vanillin assay for total lipid normalization in untargeted quantitative lipidomic LC–MS/MS applications | Bailey L.S.; Prajapati D.V. et al. | Analytical Chemistry | https://doi.org/10.1021/acs.analchem.2c03488.s003 |
| Vitamin C and Omega-3 Fatty Acid Intake Is Associated with Human Periodontitis—A Nested Case-Control Study | Mewes L.; Knappe C. et al. | Nutrients | https://doi.org/10.3390/nu14091939 |
| Development and application of a fast ultra-high performance liquid chromatography-trapped ion mobility mass spectrometry method for untargeted lipidomics | Merciai F.; Musella S. et al. | Journal of Chromatography A | https://doi.org/10.1016/j.chroma.2022.463124 |
| Fish metabolome from sub-urban lakes of the Paris area (France) and potential influence of noxious metabolites produced by cyanobacteria | Marie B.; Gallet A. | Chemosphere | https://doi.org/10.1016/j.chemosphere.2022.134035 |
| Carissa edulis Vahl (Apocynaceae) extract, a medicinal plant of Benin pharmacopoeia, induces potent endothelium-dependent relaxation of coronary artery rings involving nitric oxide | Hounguè U.; Villette C. et al. | Phytomedicine | https://doi.org/10.1016/j.phymed.2022.154370 |
| The metabolomic profile in amyotrophic lateral sclerosis changes according to the progression of the disease: An exploratory study | Marino C.; Grimaldi M. et al. | Metabolites | https://doi.org/10.3390/metabo12090837 |
| Eusociality is linked to caste-specific differences in metabolism, immune system, and somatic maintenance-related processes in an ant species | Quque M.; Villette C. et al. | Cellular and Molecular Life Sciences | https://doi.org/10.1007/s00018-021-04024-0 |
| An Aminopyrimidone and Aminoimidazoles Alkaloids from the Rodrigues Calcareous Marine Sponge Ernsta naturalis | Campos P.; Herbette G. et al. | Marine drugs | https://doi.org/10.3390/md20100637 |
| Comparative Evaluation of Different Targeted and Untargeted Analytical Approaches to Assess Greek Extra Virgin Olive Oil Quality and Authentication | Drakopoulou S.; Orfanakis E. et al. | Molecules | https://doi.org/10.3390/molecules27041350 |
| Differential effects of obesity, hyperlipidaemia, dietary intake and physical inactivity on type I versus type IV allergies | Rohmann N.; Munthe L. et al. | Nutrients | https://doi.org/10.3390/nu14112351 |
| Tailoring composition and nanostructures in supramolecular solvents: Impact on the extraction efficiency of polyphenols from vegetal biomass | Sánchez-Vallejo C.; Ballesteros-Gómez A. et al. | Separation and Purification Technology | https://doi.org/10.2139/ssrn.4018944 |
| Validation of the traditional medicinal use of a Mexican endemic orchid (Prosthechea karwinskii) through UPLC-ESI-qTOF-MS/MS characterization of its bioactive compounds | Barragán-Zarate G.S.; Lagunez-Rivera L. et al. | Heliyon | https://doi.org/10.1016/j.heliyon.2022.e09867 |
| Analysis of Muscle Lipidome in Juvenile Rainbow Trout Fed Rapeseed Oil and Cochayuyo Meal | Quiñones J.; Díaz R. et al. | Biomolecules | https://doi.org/10.3390/biom12060805 |
| The Trisubstituted Isoxazole MMV688766 Exerts Broad-Spectrum Activity against Drug-Resistant Fungal Pathogens through Inhibition of Lipid Homeostasis | Puumala E.; Zaslaver O. et al. | Mbio | https://doi.org/10.1128/mbio.02730-22 |
| Dynamic changes of serum metabolites associated with infection and severity of patients with acute hepatitis E infection | Wu J.; Xu Y. et al. | Journal of Medical Virology | https://doi.org/10.1002/jmv.27669 |
| Molecular and metabolic alterations of 2, 3-dihydroquinazolin-4 (1 H)-one derivatives in prostate cancer cell lines | Dahabiyeh L.A.; Hourani W. et al. | Scientific Reports | https://doi.org/10.1038/s41598-022-26148-4 |
| Biosynthesis and antifungal activity of fungus-induced O-methylated flavonoids in maize | Förster C.; Handrick V. et al. | Plant physiology | https://doi.org/10.1093/plphys/kiab496 |
| Unveiling the mechanism of action of nature-inspired anti-cancer compounds using a multi-omics approach | Soares N.C.; Ali A. et al. | Journal of Proteomics | https://doi.org/10.1016/j.jprot.2022.104660 |
| Multicomponent bioactive extract from red stage Haematococcus pluvialis wet paste: avoiding the drying step and toxic solvents | Castillo A.; Pereira S. et al. | Journal of Applied Phycology | https://doi.org/10.1007/s10811-022-02712-3 |
| Biological and Chemical Contamination of Air, Water and Soil in Illegal, Uncontrolled Refuse Storage Areas in Poland | Szulc J.; Nizioł J. et al. | Water and Soil in Illegal, Uncontrolled Refuse Storage Areas in Poland | https://doi.org/10.2139/ssrn.4283613 |
| In vitro α-glucosidase inhibitory activity of Tamarix nilotica shoot extracts and fractions | Daou M.; Elnaker N.A. et al. | Plos one | https://doi.org/10.1371/journal.pone.0264969 |
| Valorization of spent sugarcane fermentation broth as a source of phenolic compounds | Oliveira C.M.; Horta B. et al. | Processes | https://doi.org/10.3390/pr10071339 |
| Gut Microbiota Associated with Gestational Health Conditions in a Sample of Mexican Women | Benítez-Guerrero T.; Vélez-Ixta J.M. et al. | Nutrients | https://doi.org/10.3390/nu14224818 |
| The Arabidopsis thaliana–Streptomyces interaction is controlled by the metabolic status of the holobiont | Graindorge S.; Villette C. et al. | International Journal of Molecular Sciences | https://doi.org/10.3390/ijms232112952 |
| In Vitro and In Vivo Antidiabetic Activity, Phenolic Content and Microscopical Characterization of Terfezia claveryi | Abu-Odeh A.; Shehadeh M. et al. | Molecules | https://doi.org/10.3390/molecules27154843 |
| Segmental bronchial allergen challenge elicits distinct metabolic phenotypes in allergic asthma | Zhu Y.; Esnault S. et al. | Metabolites | https://doi.org/10.3390/metabo12050381 |
| Exploring native Scutellaria species provides insight into differential accumulation of flavones with medicinal properties | Costine B.; Zhang M. et al. | Scientific Reports | https://doi.org/10.1038/s41598-022-17586-1 |
| Molecular Network Guided Cataloging of the Secondary Metabolome of Selected Egyptian Red Sea Soft Corals | Hegazi N.M.; Mohamed T.A. et al. | Marine Drugs | https://doi.org/10.3390/md20100630 |
| Identification of Insulin Resistance Biomarkers in Metabolic Syndrome Detected by UHPLC-ESI-QTOF-MS | Alsoud L.O.; Soares N.C. et al. | Metabolites | https://doi.org/10.3390/metabo12060508 |
| Valorization of Spent Sugarcane Fermentation Broth as a Source of Phenolic Compounds. Processes 2022, 10, 1339 | Oliveira C.; Horta B. et al. | Processes | https://doi.org/10.3390/pr10071339 |
| Recent advances in understanding of Alzheimer’s disease progression through mass spectrometry-based metabolomics | Mill J.; Li L. | Phenomics | https://doi.org/10.1007/s43657-021-00036-9 |
| A combination of metabolomics and machine learning results in the identification of a new cyst nematode hatching factor | Vlaar L.E.; Thiombiano B. et al. | Metabolites | https://doi.org/10.3390/metabo12060551 |
| Cell wall strengthening by phenylpropanoid dehydrodimers during the plant hypersensitive cell death | Kanawati B.; Bertic M. et al. | bioRxiv | https://doi.org/10.1101/2022.12.20.521293 |
| Single-Cell Mass Spectrometry of Metabolites and Proteins for Systems and Functional Biology | Portero E.P.; Pade L.R. et al. | Single Cell ‘Omics of Neuronal Cells | https://doi.org/10.1007/978-1-0716-2525-5_5 |
| A Liquid Chromatography-Mass Spectrometry Method to Study the Interaction between Membrane Proteins and Low-Molecular-Weight Compound Mixtures | Ogiso H.; Suno R. et al. | Molecules | https://doi.org/10.3390/molecules27154889 |
| Congenital iRHOM2 deficiency causes ADAM17 dysfunction and environmentally directed immunodysregulatory disease | Kubo S.; Fritz J.M. et al. | Nature Immunology | https://doi.org/10.1038/s41590-021-01093-y |
| Social environment and chronological age shape eusocial insect species: the case of the ant workers | Quque M.; Brun C. et al. | https://doi.org/10.1101/2022.06.13.495886 | |
| AP-4-mediated axonal transport controls endocannabinoid production in neurons | Davies A.K.; Alecu J.E. et al. | Nature Communications | https://doi.org/10.1038/s41467-022-28609-w |
| Untargeted Metabolomics of S treptomyces Species Isolated from Soils of Nepal | Bhattarai B.R.; Khadayat K. et al. | Processes | https://doi.org/10.3390/pr10061173 |
| Metabolomic Study on Tridacna maxima Giant Clams Reveals Metabolic Fingerprint of Environmental Pollutants | Almulhim F.; Rossbach S. et al. | Frontiers in Marine Science | https://doi.org/10.3389/fmars.2022.813404 |
| Mass spectrometry-based nontargeted and targeted analytical approaches in fingerprinting and metabolomics of food and agricultural research | Liu Z.; Zhang M. et al. | Journal of Agricultural and Food Chemistry | https://doi.org/10.1021/acs.jafc.2c01878 |
| Metabolomics-assisted discovery of a new anticancer GLS-1 inhibitor chemotype from a nortopsentin-inspired library: From phenotype screening to target identification | Carbone D.; Vestuto V. et al. | European Journal of Medicinal Chemistry | https://doi.org/10.1016/j.ejmech.2022.114233 |
| Ion mobility mass spectrometry in the omics era: Challenges and opportunities for metabolomics and lipidomics | Paglia G.; Smith A.J. et al. | Mass spectrometry reviews | https://doi.org/10.1002/mas.21686 |
MetaboScape® Bibliography 2021
| Title | Author | Publication | Link |
|---|---|---|---|
| Expanding the Scope of Detectable Microbial Natural Products by Complementary Analytical Methods and Cultivation Systems | Bader C.D.; Haack P.A. et al. | 2021 J. Nat. Prod. | https://doi.org/10.1021/acs.jnatprod.0c00942 |
| Metabolic Dynamics of In Vitro CD8+ T Cell Activation | Edwards-Hicks J.; Mitterer M. et al. | 2021 Metabolites | https://doi.org/10.3390/metabo11010012 |
| Complementing Matrix-Assisted Laser Desorption Ionization-Mass Spectrometry Imaging with Chromatography Data for Improved Assignment of Isobaric and Isomeric Phospholipids Utilizing Trapped Ion Mobility-Mass Spectrometry | Helmer P.O.; Nordhorn I.D.; et al. | 2021 Anal. Chem. | https://dx.doi.org/10.1021/acs.analchem.0c03942 |
| Distribution and degradation trend of micropollutants in a surface flow treatment wetland revealed by 3D numerical modelling combined with LC-MS/MS | Maurer L.; Villette C. et al. | 2021 Water Res. | https://doi.org/10.1016/j.watres.2020.116672 |
| Analysis of the metabolic switch induced by the spirulina peptide SP6in high fat diet ApoE-/-mice model: A direct infusion FT-ICR-MS basedapproach | Sommella E.; Carrizzo A. et al. | 2021 J. Pharm. Bio. Anal. | https://doi.org/10.1016/j.jpba.2020.113865 |
| Comparison of lipidome profiles of Caenorhabditis elegans—results from an inter‑laboratory ring trial | Spanier B.; Laurençon A. et al. | 2021 Metabolomics | https://doi.org/10.1007/s11306-021-01775-6 |
| Metabolomic Profiling of Human Urine Samples Using LC-TIMS-QTOF Mass Spectrometry | Di Poto C.; Tian X. et al. | 2021 JASMS | https://doi.org/10.1021/jasms.0c00467 |
| Metabolome-based profiling of African baobab fruit (Adansonia digitata L.) using a multiplex approach of MS and NMR techniques in relation to its biological activity | Baky M.H.; Badawy M.T. et al. | 2021 RSC Adv. | https://doi.org/10.1039/D1RA08277A |
| Multiomics Method Enabled by Sequential Metabolomics and Proteomics for Human Pluripotent Stem-Cell-Derived Cardiomyocytes | Bayne E.F.; Simmons A.D. et al. | 2021 J. Proteome Res. | https://doi.org/10.1021/acs.jproteome.1c00611 |
| High-Resolution Mass Spectrometry for the Comprehensive Characterization of Plant-Pigment-Based Tattoos and Dyes Formulations | Rubio L.; Garcia-Jares C. and Lores M. | 2021 Cosmetics | https://doi.org/10.3390/cosmetics8020055 |
| Comparative sphingolipidomic analysis reveals significant differences between doxorubicin-sensitive and -resistance MCF-7 cells | Shammout O.D.A.; Ashmawy N.S. et al. | 2021 PLoS One | https://doi.org/10.1371/journal.pone.0258363 |
| Trapped Ion Mobility Incorporated in LC–HRMS Workflows as an Integral Analytical Platform of High Sensitivity: Targeted and Untargeted 4D-Metabolomics in Extra Virgin Olive Oil | Drakopoulou S.K.; Damalas D.E. et al. | 2021 J. Agric. Food Chem | https://doi.org/10.1021/acs.jafc.1c04789 |
| Circulating exosomes and gut microbiome induced insulin resistance in mice exposed to intermittent hypoxia: Effects of physical activity | Khalyfa A.; Ericsson A. et al. | 2021 eBioMedicine | https://doi.org/10.1016/j.ebiom.2021.103208 |
| Metabolomics approach to understand the hepatitis C virus induced hepatocellular carcinoma using LC-ESI-MS/MS | Kumari S.; Ali A. et al. | 2021 Arab J of Chem | https://doi.org/10.1016/j.arabjc.2020.11.013 |
MetaboScape® Bibliography 2020
| Title | Author | Publication | Link |
|---|---|---|---|
| A fungal pathogen induces systemic susceptibility and systemic shifts in wheat metabolome and microbiome composition | Seybold, H.; Demetrowitsch, T.J. et al. | 2020. Nature Communications | https://doi.org/10.1038/s41467-020-15633-x |
| A simultaneous exploratory and quantitative amino acid and biogenic amine metabolic profling platform for rapid disease phenotyping via UPLC-QToF-MS | Gray, N.; Lawler, N.G. et al. | 2020. Talanta | https://doi.org/10.1016/j.talanta.2020.121872 |
| An enhanced Isotopic Fine Structure method for exact mass analysis in discovery metabolomics: FIA-CASI-FTMS | Thompson, C.J.; Witt, M. et al. | 2020. J. Am. Soc. Mass Spectrom | https://doi.org/10.1021/jasms.0c00047 |
| An untargeted metabolomic approach for the putative characterization of metabolites from Scenedesmus obliquus in response to cadmium stress | Mangal, V.; Nguyen, T.Q. et al. | 2020. Environmental Pollution | https://doi.org/10.1016/j.envpol.2020.115123 |
| Development of a NanoLC-MS workflow for high-sensitivity global lipidomic analysis | Buzatto, A.z.; Kwon, B.K. et al. | 2020. Analytica Chimica Acta | https://doi.org/10.1016/j.aca.2020.09.001 |
| Distribution and degradation trend of micropollutants in a surface flow treatment wetland revealed by 3D numerical modelling combined with LC-MS/MS | Maurer, L.; Villette, C. et al. | 2020 / 2021. Water Research | https://doi.org/10.1016/j.watres.2020.116672 |
| Effect of ultraviolet radiation on the metabolomic profiles of potentially toxic cyanobacteria | Jacinavicius, F.R.; Geraldes, V. et al. | 2020. FEMS Microbial Ecology | https://doi.org/10.1093/femsec/fiaa243 |
| Environmental exposure to phthalates and dementia with Lewy bodies: contribution of metabolomics | Agin, A.; Blanc, F. et al. | 2020. J Neurol Neurosurg Psychiatry | http://dx.doi.org/10.1136/jnnp-2020-322815 |
| Evaluation of the deterioration state of archaeological wooden artifacts: A nondestructive protocol based on direct analysis in real time – mass spectrometry (DART-MS) coupled to chemometrics | Guo, J.; Zhang, M. et al. | 2020. Analytical Chemistry | https://doi.org/10.1021/acs.analchem.0c01429 |
| Expanding the scope of detectable microbial natural products by complementary analytical methods and cultivation systems | Bader, C.D.; Haack, P.A. et al. | 2020. ChemRxiv – under review | https://doi.org/10.26434/chemrxiv.12497537.v1 |
| Feature-based molecular networking in the GNPS analysis environment | Nothias, L.F.; Petras, D. et al. | 2020. Nature Methods | https://doi.org/10.1038/s41592-020-0933-6 |
| Influence of abiotic stress factors on the antioxidant properties and polyphenols profile composition of green barley (Hordeum vulgare L.) | Kowalczewski, P.L.; Radzikowska, D. et al. | 2020. International Journal of Molecular Sciences | https://doi.org/10.3390/ijms21020397 |
| Investigating time dependent cocoa bean fermentation by ESI-FT-ICR mass spectrometry | Kuhnert, N.; D’souza, R.N. et al. | 2020. Food Research International | https://doi.org/10.1016/j.foodres.2020.109209 |
| In vivo characterisation of the toxicological properties of DPhP, one of the main degradation product of aryl phosphate esters | Ruby, S.; Marín-Sáez, J. et al. | 2020. bioRxiv. under review | https://www.biorxiv.org/content/10.1101/2019.12.26.888057v2 |
| Large scale micropollutants and lipids screening in the sludge layers and the ecosystem of a vertical flow constructed wetland | Maurer, L.; Villette, C. et al. | 2020. Science of The Total Environment | https://doi.org/10.1016/j.scitotenv.2020.141196 |
| Lipidomic analyses uncover apoptotic and inhibitory effects of pyrvinium pamoate on cholangiocarcinoma cells via mitochondrial membrane potential dysfunction | Kittirat, Y.; Phetcharaburanin, J. et al. | 2020. Research Square – under review | https://www.researchsquare.com/article/rs-110218/v1 |
| Lipidome alterations induced by cystic fibrosis, CFTR mutation, and lung function | Buzatto, A.Z.; Abdel Jabar, M. et al. | 2020. Journal of Proteome Research | https://dx.doi.org/10.1021/acs.jproteome.0c00556 |
| Matrix solid-phase dispersion as a greener alternative to obtain bioactive extracts from Haematococcus pluvialis. Characterization by UHPLC-QToF | Castillo, A.; Pereira, S. et al. | 2020. RSC Advances | https://doi.org/10.1039/d0ra04378h |
| Metabolomics analysis reveals tissue-specific metabolite compositions in leaf blade and traps of carnivorous Nepenthes plants | Dávila-Lara, A.; Rodríguez-López, C.E. et al. | 2020. International Journal of Molecular Sciences | https://doi.org/10.3390/ijms21124376 |
| Molecular networking aided metabolomic profiling of beet leaves using three extraction solvents and in relation to its anti-obesity effects | Hegazia N.M.; Radwan, R.A. et al. | 2020. Journal of Advanced Research | https://doi.org/10.1016/j.jare.2020.06.001 |
| MS Imaging-Guided Microproteomics for Spatial Omics on a Single Instrument | Dewez, F.; Oejten, J. et al. | 2020. Proteomics | https://doi.org/10.1002/pmic.201900369 |
| Myxobacteria-derived outer membrane vesicles: Potential applicability against intracellular infections | Goes, A.; Lapuhs, P. et al. | 2020. Cells | https://doi.org/10.3390/cells9010194 |
| Prenatal and early postnatal cerebral D‑aspartate depletion influences L‑amino acid pathways, bioenergetic processes, and developmental brain metabolism | Grimaldi, M.; Marino, C. et al. | 2020. Journal of Proteome Research | https://dx.doi.org/10.1021/acs.jproteome.0c00622 |
| Software tools, databases and resources in metabolomics: updates from 2018 to 2019 | O’Shea, K.; Misra, B.B. | 2020. Metabolomics | https://doi.org/10.1007/s11306-020-01657-3 |
| Supercritical fluid extraction enhances discovery of secondary metabolites from Myxobacteria | Bader, C.D.; Neuber, M. et al. | 2020. Analytical Chemistry | https://doi.org/10.1021/acs.analchem.0c02995 |
| The pomace extract taurisolo protects rat brain from Ischemia-reperfusion injury | Lapi, D.; Stornaiuolo, M. et al. | 2020. Frontiers in Cellular Neuroscience | https://doi.org/10.3389/fncel.2020.00003 |
| The application of ion mobility-mass spectrometry in untargeted metabolomics: From separation to identification | Luo, M.-D.; Zhou Z.-W. et al. | 2020. Journal of Analysis and Testing | https://doi.org/10.1007/s41664-020-00133-0 |
| Trapped ion mobility spectrometry and PASEF enable in-depth lipidomics from minimal sample amounts | Vasilopoulou, C.G.; Sulek, K. et al. | 2020. Nature Communications | https://doi.org/10.1038/s41467-019-14044-x |
| Ultrahigh-resolution mass spectrometry-based platform for plasma metabolomics applied to type 2 diabetes research | Zhu, Y.; Wancewicz, B. et al. | 2020. Journal of Proteome Research | https://dx.doi.org/10.1021/acs.jproteome.0c00510 |
| Untargeted-metabolomics differentiation between poultry samples slaughtered with and without detaching spinal cord | Abbas, N.; Ali, A. et al. | 2020. Arabian Journal of Chemistry | https://doi.org/10.1016/j.arabjc.2020.10.032 |
MetaboScape® Bibliography 2019
| Title | Author | Publication | Link |
|---|---|---|---|
| A boost in mitochondrial activity underpins the cholesterol-lowering effect of Annurca apple polyphenols on Hepatic cells | Sommella, E.; Badolati, N. et al. | 2019. Nutrients | https://doi.org/10.3390/nu11010163 |
| A substrate of the ABC transporter PEN3 stimulates bacterial flagellin (flg22)-induced callose deposition in Arabidopsis thaliana | Matern, A.; Böttcher, C. et al. | 2019. Journal of Biological Chemistry | http://www.jbc.org/cgi/doi/10.1074/jbc.RA119.007676 |
| Early Pep-13-induced immune responses are SERK3A/B dependent in potato | Nietzschmann, L.; Gorzolka, K. et al. | 2019. Nature Scientific Reports | https://doi.org/10.1038/s41598-019-54944-y |
| Exploring the capability of LC-MS and GC-MS multi-class methods to discriminate Virgin Olive Oils from different geographical indications and to identify potential origin markers | Olmo-García, L.; Wendt, K. et al. | 2019. European Journal of Lipid Science and Technology | https://doi.org/10.1002/ejlt.201800336 |
| Exploring the promiscuous enzymatic activation of unnatural polyketide extender units in vitro and in vivo for monensin biosynthesis | Grote M; Schulz F. | 2019. CHEMBIOCHEM | https://doi.org/10.1002/cbic.201800734 |
| Generation of a Collision Cross Section library for multi-dimensional plant metabolomics using UHPLC-Trapped Ion Mobility-MS/MS | Schroeder, M.; Meyer, S.W. et al. | 2019. Metabolites | https://doi.org/10.3390/metabo10010013 |
| Global metabolomic characterizations of Microcystis spp. highlights clonal diversity in natural bloom-forming populations and expands metabolite structural diversity | Le Manach, S.; Duval, C. et al. | 2019. Frontiers in Microbiology | https://doi.org/10.3389/fmicb.2019.00791 |
| Honey extracts inhibit PTP1B, upregulate insulin receptor expression, and enhance glucose uptake in human HepG2 cells | Lori, G.; Cecchi, L. et al. | 2019. Biomedicine & Pharmacotherapy | https://doi.org/10.1016/j.biopha.2019.108752 |
| Hydroxycinnamic acids in sunflower leaves serve as UV-A screening pigments | Stelzner, J.; Roemhild, R. et al. | 2019. Photochemical & Photobiological Sciences | https://doi.org/10.1039/C8PP00440D |
| Identification of crucial bottlenecks in engineered polyketide biosynthesis | Grote, M.; Kushnir, S. et al. | 2019. Organic & Biomolecular Chemistry | https://doi.org/10.1039/C9OB00831D |
| Impact of Cr(VI) on the oxidation of polyunsaturated fatty acids in Helianthus annuus roots studied by metabolomic tools | Gonzalez Ibarra, A.A.; Wrobel, K. et al. | 2019. Chemosphere | https://doi.org/10.1016/j.chemosphere.2018.12.145 |
| In situ localization of micropollutants and associated stress response in Populus nigra leaves | Villette, C.; Maurer, Delecolle, J. et al. | 2019. Environment International | https://doi.org/10.1016/j.envint.2019.02.066 |
| Insights into the diversity of secondary metabolites of planktothrix using a biphasic approach combining global genomics and metabolomics | Tiam, S.K.; Gugger, M. et al. | 2019. Toxins | https://doi.org/10.3390/toxins11090498 |
| JASSY, a chloroplast outer membrane protein required for jasmonate biosynthesis | Guana, L.; Denkert, N. et al. | 2019. PNAS | https://doi.org/10.1073/pnas.1900482116 |
| Plastoglobular protein 18 is involved in chloroplast function and thylakoid formation | Espinoza-Corral, Heinz, S.; Klingl, A. et al. | 2019. Journal of Experimental Botany | https://doi.org/10.1093/jxb/erz177 |
| Semi-polar root exudates in natural grassland communities | Dietz, S.; Herz, K. et al. | 2019. Ecology and Evolution | https://doi.org/10.1002/ece3.5043 |
| UHPLC-MS Analyses of Plant Flavonoids | Lei, Z.; Sumner, B.W. et al. | 2019. Current Protocols in Plant Biology | https://doi.org/10.1002/cppb.20085 |
| Xenobiotics metabolization in Salix alba leaves uncovered by mass spectrometry imaging | Villette, C.; Maurer, L. et al. | 2019. Metabolomics | https://doi.org/10.1007/s11306-019-1572-8 |
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